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Files patterns

f|*.csv

Defined in file: brainvisa/types/builtin.py

Used in the following processes

3D hierarchical analysis
[Analysis] Hierarchical ROI Analysis
[Atlas] Hierarchy Tools
[Parcellation] Generate segmentation scores
[Volume] Parallel label features processing
Anatomist clusters inspect tool
Apply multiple deformations
Automatic CT segmentation
Automatic PET segmentation
Average spheres' center of all PET reconstructions
Brain Volumes
Brainvisa Show Text
Build eroded ROI in CT
Build sphere mask in PET
Build spheres' mask in CT
Check FWHM informations
compare many tagged reconstructions (for one sphere)
Component Histogram Plot
Compute cover factor
Compute GTM PVC based methods
Copy data between databases
Copy Referential
CorrelationProcessing
Covariate manager
Create an inter subject measures file
Create/update covariate table
Create/update PET covariate table
CT segmentation choice
Database QC table
DatScan Triple Line - FWHM estimation
Define Jaszczak specifications
DICE index
Dices table (and graph) generator
Digital atlas prepare pipeline
DigitalAtlasHierarchyGenerate
Extract graph from CSV
Extract list of values
Extract one measure from the morphometry statistics table
Find other little spheres in noise (ghosts)
Find palette bounds in CT
Find spheres' center in CT
Find spheres' center in PET
Find spheres' center using centers found by user
Freesurfer aparcstats2table
Freesurfer asegstats2table
GeneralImport
Generate FWHM informations
Global Sulcal Index
Graph Point cloud Label
Hierarchical ROI Analysis
Hoffman - Compute Coregistration and QC
Hoffman - Coregistration
Import FSL Connectomes.
Import volBrain processes results
Import volBrain results
ImportData
Jaszczak pipeline
Manual CT segmentation
Manual PET segmentation
Merge thalamus/white matter statistics in PET space
Mesh Area
Mesh Fiedler length
morpho_report
Morphologist QC table
Müller-Gärtner
New Referential
Nuclear Imaging quality check
Optimal PET Amyloid Long (OPAL spm12)
Parcels Area
Parcels Volume
pet pipeline using MRI (spm12)
pet pipeline using MRI (spm8)
PET segmentation choice
PVC pipeline
Quantify spheres using activities
Quantify spheres using concentrations
RBV - GTM
RBV - sGTM
Run AssemblyNet
Show data table
Simplified Morphologist 2025
SPAM recognition, global registration
SPAM recognition, local registration
SPAM recognition, Markovian model
SPECT PVC pipeline
SPM - Brain Tissues Volumes
SPM quantification
spm12 - Deformations : composition - generic
spm12 - One sample T-test - generic
spm12 - Paired T-test - generic
spm12 - Two sample T-test - generic
spm8 - One sample T-test - generic
spm8 - Paired T-test - generic
spm8 - Two sample T-test - generic
Statistics in ROI - generic
stats of ONE single tagged reconstruction (for one sphere)
Sulci Curvature Stats
Sulci Distance to Lesion
Sulci Distance to Lesion Stats
Sulci Distance to Neighbours Stats
Sulci graph measurements filtering
Sulci graph morphometry by subject
Sulci labeling differences across subjects
Sum rods
Surface Area and Volume
Thalamus/white matter statistics in PET space
Theoretical Phantom Activity Calculation
Validity Indexes
View CSV file
View reconstruction comparison
Voxel by voxel analysis (SPM12)
Write a different measures in csv file
Write spheres' center in Minf

Associated types

4D Volume
Analysis Report
Any Type
Brain volumetry measurements
Cortical Thicknesses Table
Covariate table for SPM
CSV file
Data Table
Expected Results
FWHM informations
Global Volumetry Table
GTM PVC based corrected images data
Hippocampal Volumetry Table
Mesh geometric measurements
Numerical Table
Phantom Activity Stats
Phantom Graph
Phantom Graph ColdSph
Phantom Graph for one sphere and many centers
Phantom Graph for one sphere compare reconstructions
Phantom Graph HotSph
Phantom Noise Stats
Phantom PVC Corrected Uptakes Stats
Phantom Result
Phantom ROI Sph Ghosts Stat
Phantom Spec
Phantom Sph Ghosts Result
Phantom Stats
Phantom Theoric Values
QC table
Snapshots Features Table
Snapshots Grey White Quality Scores
Snapshots Meshcut Quality Scores
Snapshots Pial Mesh Quality Scores
Snapshots Probability Map Quality Scores
Snapshots Split Brain Quality Scores
Snapshots Sulci Quality Scores
Snapshots White Mesh Quality Scores
SPECT phantom FWHM statistics
SPM tissue volumes
Statistics
Statistics for many PetSubjects
Statistics for One PetSubject
Statistics in GTM PVC based corrected images
Sulcal morphometry measurements
Sulcal Openings Table
Sulci Labels Segmentwise Posterior Probabilities
Text file
Thalamus White Matter statistics for many subjects
Thalamus White Matter statistics for one subject